The GH receptor (GHR) is one of several members of the cytokine superfamily of receptors, also referred to as hematopoietin receptors. There are over 200 protein members of the family currently in the InterPro database. Cytokine receptors are found on various cell types and are generally involved in cell growth and differentiation. Other family members include receptors for thrombopoietin, erythropoietin, prolactin, leptin, interleukins, interferon a, b and g, granulocyte stimulating factor, and ciliary neurotrophic factor. These receptors share the same three-domain architecture, however most of the sequence homology between them is in the extracellular domain responsible for ligand binding, which structurally resembles the Ig-like fibronectin type III (Fn3) domain found in a wide variety of protein families. Specific functions have been mapped to short sequences within individual Fn3 domains. The GHR contains two non-identical Fn3 domains. The intracellular domain of cytokine receptors are not homologous, although they do contain a small conserved proline-rich motif, termed ‘box 1’, required for tyrosine kinase binding.
Interpro Entry |
Method accession |
Graphical match |
Method name |
IPR002996 |
PS50301 |
|
CR1A |
IPR003528 |
PS01352 |
|
HEMATOPO_REC_L_F1 |
IPR003961 |
PF00041 |
|
fn3 |
IPR003961 |
SM00060 |
|
fn3 |
IPR008957 |
SSF49265 |
FN_III-like |
|
Classification |
Domain ID |
Structural Domains |
|
2.60.40.30.2 |
1axiB1 |
|
|
2.60.40.30.3
|
1a22B2 |
|
|
b.1.2.1
|
d1kf9c1 |
|
|
b.1.2.1 |
d1a22b2 |
|
|
b.1.2.1 |
d1kf9b2 |
|
|
From the graphical match above, you can see that the signatures in InterPro are divided into four entries for the human GHR (hGHR). These entries give information about the domain architecture of the protein, as well as its family relationships.
Starting
with the domain architecture of the hGHR, there are three domains in hGHR: an
N-terminal extracellular ligand-binding domain, a short transmembrane domain
and a C-terminal intracellular tyrosine kinase-binding domain. Only the extracellular domain is represented
in InterPro, because it is the only domain that is well characterised and which
represents the cytokine superfamily to which hGHR belongs; the other domains
show little sequence conservation between family members. The extracellular domain consists of two
non-identical fibronectin type III (Fn3)-like subdomains, both of which are contained
in IPR008957,
representing the Fn3-like fold, and which has one signature, SSF49265
from the SUPERFAMILY database. Some
cytokine receptors only contain one Fn3 domain of the type found in IPR003961,
as represented by PF00041
and SM00060
from the PFAM and SMART databases, respectively. The last five entries in the table above are from the structural
classification databases CATH and SCOP (the names
such as d1kf9c1 are derived from the PDB entry upon which they are based; here
PDB entry 1kf9, chain c, region 1). If
you follow the links to these databases you will find descriptions of the
structural features and classification of the Fn3 domains, as well as links to
the corresponding PDB entries: 1axiB1 and d1kf9c1 for information on the N-terminal
Fn3 domain; 1a22B2, d1a22b2 and d1kf9b2 for information on the second Fn3
domain.
To look at the family relationships that involve GHR, we need to start with the entry at the top of the table, IPR002996, which has one signature representing the cytokine receptor family, PS50301 from the PROSITE database. This is quite a large family of proteins (over 200), that is the parent of several subfamily members, including the IPR003528 hematopoietin receptor subfamily that contains GHR, and which is represented by one signature, PS01352 from the PROSITE database.
The crystallographic structure of the GHR has been determined. A description and visualisation of the structural features of GHR can be found at the PDB. Here you can find out more about the molecular mechanisms of GHR activation and signal transduction.